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Home For Data Users Download Data Download Notebook Results Download via Jupyter Web Interface Download via Scratch Directory and CLI

Download Notebook Results

Once you've processed or subsetted large data in a dataset notebook, you can download your results to your local machine or a remote computer.

Download via Jupyter Web Interface

For smaller files, you can right-click in the Jupyter file browser and select Download. Download

Download via Scratch Directory and CLI

For larger files or when working on a machine without a browser, copy your results to your scratch directory and download them using the MSD-LIVE CLI.

Step 1: Copy to Scratch Directory

  1. Open the File Browser (left sidebar in Jupyter)
  2. Select the files and/or folders you want to copy
  3. Click the blue cloud button in the toolbar
  4. Wait for the copy job to complete

Copy To Scrach Button

Step 2: Download from Scratch Directory

Use the MSD-LIVE CLI to download files from your scratch directory to your local machine or a remote computer.

See the Downloading Files section of the CLI documentation for complete instructions on using the msdlive download --scratch command.

Scratch Directory Cleanup

Files in your scratch directory will be automatically deleted after 24 hours. Be sure to download anything you need before then.